PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027097-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 323aa    MW: 35378.2 Da    PI: 4.6895
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027097-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.3e-16168204135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt +  Tp +Rrgp+g++tLCnaCGl+++ kg+
  AUR62027097-RA 168 CQHCGTNEksTPAMRRGPSGPRTLCNACGLMWANKGT 204
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEVSTKQFED QNQLAIMEED DDDDFSAGGD SAGEDAHVSI AIPGEVYVFP AVTPDKVQAV  60
LLLLGGRDVS TSVPTSEFLL QQHHMALGDP SCGQKISHRI ASLVRFRKKR KERCYDKKIR  120
YTCRKEVAQR MHRKNGQFVS LKDRYNLAAV NWDPNDGTPP PECVPRSCQH CGTNEKSTPA  180
MRRGPSGPRT LCNACGLMWA NKGTLRDLSK AGRIIPFQGD PDTPSDVKPL AIEPDSSYGN  240
QETRKSPEEA KPFASESGKT STREDEQDLL ENDEAVTNDS AVSLQNASVS VTEQEAIEEV  300
TNGSGTEFEI PSGFDESMGA FY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112RKKRKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-61GATA family protein