PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62027125-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 938aa MW: 103909 Da PI: 6.9412

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62027125-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.9	9.9e-29	612	662	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +k+isl++l++yF++++kdAA+++gvc+T+LKriCRq+GI+RWP+Rkik++ AUR62027125-RA 612 QKTISLDVLRQYFAGSLKDAARSIGVCPTTLKRICRQHGIARWPSRKIKKV 662 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 938 aa Download sequence
MDDGSFNPTN NPPVFGNIDY DLMEQLLDDG CWLQTADGSN LLQSGTSSGQ GQGPISPSTS 60 RGLSYPSSFS FPSLEPVSSS LTSPGNQRSS YREKWSPKAE QAVDSENQDD SAITPPAAAA 120 VLNQARSFSW EGNELNRILW IGPKANSGPS SSVRERLMRA VSSWRDLNRN RDVLIQIWVP 180 IKKGLKSFLT TVEQPYFHQP SSIRLLHYRD VSEKYEFLAD EDTKQAHGLP GRVFLGKAPE 240 WTPDVRYFRT EEYPRQVYAR QFDVRGSIAL PVFEKGSGDS LGVVEIIMTT DKFDYRPEIE 300 SVCKALETVH LRSSEILDTP PEQSGKRTYD AVQPEILTVV RAVCDTLDLP LAQTWAPCSQ 360 EGKGGCWHSE NNVNCVSIID SACYVRDQRV MDFHKACSDH HLLRSQGGIV GKAFDTNQPC 420 YATDITEFSK VEYPLSHHAR MIGLRGAVAV RLRSIYHEKN DYVLEFYLPS NVQEKGLAFH 480 SRIWQSVSMV IQQHCRYLNF ITDKDFEQKV LFPGKPAADN ETKETSWFSQ MMEPQRKGKE 540 VVVSLEFGED EPSKGFKVMN WSDNEPSLQL GQALSDSENI NQDSGSKGIS GTSSGGRLPL 600 SARSEKRRTK TQKTISLDVL RQYFAGSLKD AARSIGVCPT TLKRICRQHG IARWPSRKIK 660 KVDHSLRKLQ LVIDSVQGAE GSIQLSSFYS KFPELNSPTT QPKQSQVSSI NLNNQPKQQP 720 TTQPEGTIHP TGGTNSNSPA STSSSQTSTS SYCFSSGAKM SSPVTTIASG SKDASTIEDP 780 SGSLKRARSE AELQVLISSK KEASQILERS QSNKTLAEHP SFETLPPLPI TKSWLSREAG 840 VFKAKATFGD EKVRFSILPN MGFLDLQQEI VKRFHLEDLS KMGIKYLDDD KEWVLLTCDA 900 DLEECIDIHK SSGSHTIKLS ISPLSSLASS FGSSGLS*

Sequence ? help Back to Top

Protein Sequence Length: 938 aa Download sequence

MDDGSFNPTN NPPVFGNIDY DLMEQLLDDG CWLQTADGSN LLQSGTSSGQ GQGPISPSTS  60
RGLSYPSSFS FPSLEPVSSS LTSPGNQRSS YREKWSPKAE QAVDSENQDD SAITPPAAAA  120
VLNQARSFSW EGNELNRILW IGPKANSGPS SSVRERLMRA VSSWRDLNRN RDVLIQIWVP  180
IKKGLKSFLT TVEQPYFHQP SSIRLLHYRD VSEKYEFLAD EDTKQAHGLP GRVFLGKAPE  240
WTPDVRYFRT EEYPRQVYAR QFDVRGSIAL PVFEKGSGDS LGVVEIIMTT DKFDYRPEIE  300
SVCKALETVH LRSSEILDTP PEQSGKRTYD AVQPEILTVV RAVCDTLDLP LAQTWAPCSQ  360
EGKGGCWHSE NNVNCVSIID SACYVRDQRV MDFHKACSDH HLLRSQGGIV GKAFDTNQPC  420
YATDITEFSK VEYPLSHHAR MIGLRGAVAV RLRSIYHEKN DYVLEFYLPS NVQEKGLAFH  480
SRIWQSVSMV IQQHCRYLNF ITDKDFEQKV LFPGKPAADN ETKETSWFSQ MMEPQRKGKE  540
VVVSLEFGED EPSKGFKVMN WSDNEPSLQL GQALSDSENI NQDSGSKGIS GTSSGGRLPL  600
SARSEKRRTK TQKTISLDVL RQYFAGSLKD AARSIGVCPT TLKRICRQHG IARWPSRKIK  660
KVDHSLRKLQ LVIDSVQGAE GSIQLSSFYS KFPELNSPTT QPKQSQVSSI NLNNQPKQQP  720
TTQPEGTIHP TGGTNSNSPA STSSSQTSTS SYCFSSGAKM SSPVTTIASG SKDASTIEDP  780
SGSLKRARSE AELQVLISSK KEASQILERS QSNKTLAEHP SFETLPPLPI TKSWLSREAG  840
VFKAKATFGD EKVRFSILPN MGFLDLQQEI VKRFHLEDLS KMGIKYLDDD KEWVLLTCDA  900
DLEECIDIHK SSGSHTIKLS ISPLSSLASS FGSSGLS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein