PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62027152-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 223aa MW: 25666.3 Da PI: 8.4601

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62027152-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.3	1.3e-48	12	138	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v+g+k++ ++i ++iy+++PwdLp +k e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d++++s AUR62027152-RA 12 PGFRFHPTEEELLDFYLKNMVNGRKMHH-DIIGFLNIYRFDPWDLPGLAKIAEREWYFFVPRDRKHSNGGRPNRTTEHGFWKATGSDRKIVSLse 105 9**********************999.99***********8778899*********************************99765 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++gl+ktLvfy+grap+g+ktdW+m+eyrl AUR62027152-RA 106 PKRVIGLRKTLVFYQGRAPRGTKTDWIMNEYRL 138 6778*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MDDKTSPNFE LPGFRFHPTE EELLDFYLKN MVNGRKMHHD IIGFLNIYRF DPWDLPGLAK 60 IAEREWYFFV PRDRKHSNGG RPNRTTEHGF WKATGSDRKI VSLSEPKRVI GLRKTLVFYQ 120 GRAPRGTKTD WIMNEYRLPD NYVLPKKEDQ TTFVENNCKV AAAAVTPTPN TIQLPFGKEN 180 LELQVPKSGM DWGQDPFCSL SCSPWLENLL NFSSPSLISQ IL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-83	NAC family protein