PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027220-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 198aa    MW: 22669 Da    PI: 9.6836
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027220-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.33.3e-1978177198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE......EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy....rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f ++  ps   ++  + +pk+fa ++ ++++++ t  l++ +g+ W v+ +      +k ++ ++++GW++F+  n+Lk+gD+++F+l++++ef 
  AUR62027220-RA  78 FATKICPSFEESKFAMDIPKTFAHKFLHNEPCPSTFNLQTDTGKAWPVRSCAsvgnYGKTNMKLMGAGWRKFALGNNLKAGDICIFELIKKQEF- 171
                     566777888889999********99999999*******************8788877777789*************************997777. PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                      +v+++r
  AUR62027220-RA 172 -KVHIIR 177
                     .999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSASEIEYPF DPEPCRGNNP LQKRKTNSSE KVHSRSDKRM QSVTSGKLII SYNKRYFTPE  60
EWRRVRAYYA DHCKHPSFAT KICPSFEESK FAMDIPKTFA HKFLHNEPCP STFNLQTDTG  120
KAWPVRSCAS VGNYGKTNMK LMGAGWRKFA LGNNLKAGDI CIFELIKKQE FKVHIIRVPY  180
AKEKLENIPV IIEVESD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.11e-11B3 family protein