PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027225-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 210aa    MW: 24529 Da    PI: 6.6617
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027225-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.4e-185811799
                    E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    ++p+kf +e+++k    + +tl+ +sg  W+v l   ++++ + l++GW++Fvk++ L+egDf+vF+++++s f  +v +f+k
  AUR62027225-RA  5 RIPRKFKDEYKEK--LLQRVTLRGPSGDCWTVAL--AQRGEDIELRNGWRDFVKDHSLEEGDFLVFQHVENSLF--NVLMFDK 81
                    59****9999755..6779***************..99999999***********************9998888..8888887 PP
2B344.92e-141151861691
                     EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
              B3  16 lvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                      ++p++fa+++  ++   s++++l+   ++ W+v l  +++  +++l kGW +Fv +n+L++ D +v++l ++ ++++
  AUR62027225-RA 115 STIPREFADNClPMV---SQEIRLRV-GSKIWRVSL--NRRNVQCTLNKGWAHFVLDNNLETEDYCVLELADTgTSRQ 186
                     58******8886444...56899887.78*******..999999*************************886544444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MFPQRIPRKF KDEYKEKLLQ RVTLRGPSGD CWTVALAQRG EDIELRNGWR DFVKDHSLEE  60
GDFLVFQHVE NSLFNVLMFD KTGCEREDSH FVIQDRDIRA ENCCYMRDNK TDRPSTIPRE  120
FADNCLPMVS QEIRLRVGSK IWRVSLNRRN VQCTLNKGWA HFVLDNNLET EDYCVLELAD  180
TGTSRQPLTL DVHIYRAVEK IVPLKVILP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.17e-18B3 family protein