PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62027330-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 219aa MW: 23833.4 Da PI: 9.3525

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62027330-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108.1	4.5e-34	36	90	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl AUR62027330-RA 36 KPRLRWTPDLHERFVDAVTKLGGPDKATPKSVLKLMGLKGLTLYHLKSHLQKYRL 90 79****************************************************8 PP
2	Myb_DNA-binding	70.4	3e-22	38	89	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ + mg kg+tl+++ks++qky+ AUR62027330-RA 38 RLRWTPDLHERFVDAVTKLGGPdkaTPKSVLKLMGlKGLTLYHLKSHLQKYR 89 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence
MEGGMSGVYG GGDGGSFPYH HHQALEGGVL MSRDPKPRLR WTPDLHERFV DAVTKLGGPD 60 KATPKSVLKL MGLKGLTLYH LKSHLQKYRL GQQSKKQNSS EGKTDSTNPR NSYSRYSLHC 120 SEASTSGTGH GSSSGSYDLG KEMKSIFDQI YPDHRRSEGD HQDYKGDLLK IKHEAGASGN 180 YCSLQLNLNN GSGTSNHGYD FGGAHGAEFE AKLLAYRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	9e-40	G2-like family protein