PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027666-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 186aa    MW: 21116.9 Da    PI: 9.8395
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027666-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.62.6e-1059158186
            FAR1   1 kfYneYAkevGFsvrkskskks.....krngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                     +f+++Y+k+ GF v +++ +++     +++++  ++ ++C + gk++ +++               ++r++++++C  +++   + dg wev k 
  AUR62027666-RA  59 NFFRKYGKQRGFGVFRAARNYKiengkTDKNKRRSYIWRCECAGKPDLRRRVngkrvygggLALDLNRRKTKKCDCPLEMRAACNADGSWEVRKA 153
                     6*************9988877756654333445566789********99988666677666556666999************************* PP

            FAR1  82 eleHn 86 
                      +eH 
  AUR62027666-RA 154 ITEHK 158
                     ***96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MGTPINDLLG TRGIGSGVDG TNEASPGRCV VECDNGDYED LLDHPQVGMV FSTWEDADNF  60
FRKYGKQRGF GVFRAARNYK IENGKTDKNK RRSYIWRCEC AGKPDLRRRV NGKRVYGGGL  120
ALDLNRRKTK KCDCPLEMRA ACNADGSWEV RKAITEHKYH NPTPRKSQYI SMYRQDELTT  180
AVRRK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.15e-06FAR1 family protein