PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027681-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family Trihelix
Protein Properties Length: 221aa    MW: 25474.4 Da    PI: 9.127
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027681-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.45.8e-1627117186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W+++ + +Liea  ++  +l+rg+l++++W+ev++ +     + ++ +r+ +qCk++++ l+k+yk +k++  + + e +s++p+fd l+
  AUR62027681-RA  27 CWSEDATFTLIEAWGQRYIELNRGNLRQKQWQEVADTVnnrhgHVKKARRTDVQCKNRIDTLKKKYKIEKARVLDSNGEYKSSWPFFDPLD 117
                     7*************************************987777777899********************9999888888999*****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MAEGPDSSSP SLAMISSSRP VPVREDCWSE DATFTLIEAW GQRYIELNRG NLRQKQWQEV  60
ADTVNNRHGH VKKARRTDVQ CKNRIDTLKK KYKIEKARVL DSNGEYKSSW PFFDPLDQLI  120
GSTMPLKKIS SPSPPMAVPV IEKFGEVYAK VEAEKQRQMV ELEKQRMQFA KEMECQRMQM  180
LVEMQVQLEK VKRAKRSDSN GEITLLSFVN LFDFIDLLIM *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05550.15e-48Trihelix family protein