PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027727-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 217aa    MW: 23792.5 Da    PI: 8.8938
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027727-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55.2e-214089255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  AUR62027727-RA 40 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 89
                    59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MSYSFPPPLP SYQSSNINNF LSPKPVTMKS NGLASKPTKL YRGVRQRHWG KWVAEIRLPK  60
NRTRLWLGTF DTAEEAALAY DKAAYKLRGD FARLNFPNLR HEGSHIGGEF GEYKPLHSSV  120
NAKLEAICES LAKQGNEKQG KSGKSKKKDK DVTQSMLQHG DVKAESTSDS EVGSGGSSPL  180
SDLTFGDNED MGSENFLLAS YPSNEIDWDA ILSSSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-69ERF family protein