PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62027824-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 107aa MW: 11952.5 Da PI: 9.2377

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62027824-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.9	2.4e-10	40	70	1	31
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC. CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas 31 +r++h ++Er+RR+++N+ ++ +r+l+P+++ AUR62027824-RA 40 QRMTHIAVERNRRKQMNEYLAVIRSLMPPSY 70 79**************************963 PP

Sequence ? help Back to Top
Protein Sequence Length: 107 aa Download sequence
LYQSGEAPAP STAAEPPVSG GVRRKRRRRS CKNKEEVEHQ RMTHIAVERN RRKQMNEYLA 60 VIRSLMPPSY VQRVEEGCQL NSVDDIAAAA NHILGQIKEE AVDQSL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	23	29	RRKRRRR
2	24	28	RKRRR
3	24	30	RKRRRRS
4	41	52	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	4e-23	bHLH family protein