PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027848-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ZF-HD
Protein Properties Length: 259aa    MW: 27298.6 Da    PI: 9.2192
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027848-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.81.3e-334095359
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59
                     vrY+eClkNhA+++GghavDGCgEfm++ geegt +alkCaAC+CHRnFHR+e++ 
  AUR62027848-RA 40 VVRYRECLKNHAVNIGGHAVDGCGEFMAA-GEEGTLDALKCAACNCHRNFHRKETDI 95
                    689*************************9.999********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MAVVVPPSYD PIGGSGGNSA PSRPRVSSAS GGGGERRSVV VRYRECLKNH AVNIGGHAVD  60
GCGEFMAAGE EGTLDALKCA ACNCHRNFHR KETDISGDNI TSPNTGPSPA VAPPPPAGTM  120
YPQFSGYYRT PPPPGSGYHH HYRPLAVLPS TSGGTHSGDM GDDMSHPSSS GGEGRRESGS  180
GGVGGGGSAM MMVPKKRHRT KFSQEQKDKM LAFAEKLGWR IQKHDEAAVQ QFCAEVQVTP  240
QVLKVWMHNN KHTLGKKP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.19e-47ZF-HD family protein