PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028212-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

GRF

Protein Properties

Length: 326aa MW: 36018.8 Da PI: 8.5658

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028212-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.2	6.7e-24	84	128	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRC +++++++k+CErH++rgrsrsrk++e+ AUR62028212-RA 84 DPEPGRCRRTDGKKWRCAKEAYPDSKYCERHMNRGRSRSRKHVES 128 79****************************************986 PP
2	QLQ	60.8	3.9e-21	10	46	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l+yKyL+a++ +Pp+L+++iq+ AUR62028212-RA 10 SPFTVSQWQELEHQALIYKYLIAGVSIPPDLVLPIQN 46 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 326 aa Download sequence
MNRGGSEGVS PFTVSQWQEL EHQALIYKYL IAGVSIPPDL VLPIQNSFGT SSSAFFHRPT 60 LGYCGRENSL YGIGIGLGYG KKIDPEPGRC RRTDGKKWRC AKEAYPDSKY CERHMNRGRS 120 RSRKHVESNP FSSSSSTTAS VSSLNQSLPL KFNAFASASN AASPTSNPNQ SQFQLDSIPY 180 AIPTKQYNRH LQGSKPEAGD NRSFSQCSGG NRSLIMDSAL DNTWPSMSPQ MSSLSQSKPM 240 DNSSLHDDYS HRSFINCEFG QPQSVKQGNR SLHPFFEEWP NTREVWSGLE DERANQVSFS 300 TTQLSISVPM TTTDFSASPR SPQES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-37	GRF family protein