PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028235-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 159aa    MW: 17895.6 Da    PI: 8.835
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028235-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.82e-211768256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+++g  +r++lg+f+tae Aa+a+++a+ kl+g+
  AUR62028235-RA 17 RYRGVRRRP-WGKFAAEIRDPTKQG--QRVWLGTFDTAEAAARAYDQAAFKLRGH 68
                    6********.**********98865..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MEGSSRGKQQ EGGDDVRYRG VRRRPWGKFA AEIRDPTKQG QRVWLGTFDT AEAAARAYDQ  60
AAFKLRGHLA TLNFPNEYYS KLDPIPHLPN VPRYFGTNNR PSDSTTSGVN NGRRVDRGGG  120
SSTGNTSGQP WQERQVIEFE YLDNKVLEDM LRRSEEDD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.19e-26ERF family protein