PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028236-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 165aa    MW: 18460.1 Da    PI: 9.6559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028236-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.6e-193080255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     y+GVr ++ +g+++AeIrd + ng   r++lg+f+t+e Aa a+++a+++ +g
  AUR62028236-RA 30 SYRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTPEAAALAYDQAALSTRG 80
                    69*******.**********44465..**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MIRVKEEEVT SSMSNTIKEE AAIITPSEKS YRGVRKRPWG KYAAEIRDST RNGVRVWLGT  60
FDTPEAAALA YDQAALSTRG TLAVLNFPVD VVRDSLKEMN YEFGNGCSPV LVMKNRLSIR  120
KKKSMCKKNR VKSRGSSLEN NVFVFEDLGS DYLEQLLTAS ETMH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-45ERF family protein