PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028728-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family E2F/DP
Protein Properties Length: 345aa    MW: 37631.7 Da    PI: 5.4375
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028728-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP58.97.9e-19731312871
         E2F_TDP  28 nevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                       va+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
  AUR62028728-RA  73 GAVADELVAEyadasnalgsnenqgyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 131
                     57999**99999**************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MVTGNSQEDR EKNPKGATRS WGPAVSGQSV STSGSVGSPS SRSEAGMATP ARDSTVLRLS  60
HLEIHGDDSA SQGAVADELV AEYADASNAL GSNENQGYDE KNIRRRVYDA LNVLMAMDII  120
SKDKKEIQWR GLPRTSLNDI EELKTERVGL RNRIEKKAAY LRELEEQFVG YQNLIQRNQQ  180
LYGDGNAPTG GVALPFILVQ TRPNATVEVE ISEDMQLVHF DFNSTPFELH DDNYVLKQMN  240
VSNKSLFDAE ACDIPANAGE GPSVPATTYH PQISQPPSPK TYHNESSQLP SPPKPYQPQT  300
CTSPSSSTQQ AQMTLPSSRP NTAMKSPTSP PLPGILKARV QHDR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.27e-98E2F/DP family protein