PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028737-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 257aa    MW: 28979.1 Da    PI: 5.3788
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028737-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.6e-151471147
                     TSSS-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqky 47
                     +g W++eEde+l++ ++++G g            +W+ Ia+ ++ gRt++++k++w++ 
   AUR62028737-RA 14 KGLWSPEEDEKLYNHITRFGVGcwssvpklaglqRWAQIASQLP-GRTDNEIKNFWNSC 71
                     678*****************************************.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRHSCCAKQ KLKKGLWSPE EDEKLYNHIT RFGVGCWSSV PKLAGLQRWA QIASQLPGRT  60
DNEIKNFWNS CLKKKLMKQG IDPQTHEPLS TQMQSSNNIS SSSNGFRNTA ENQKIARAVK  120
MEQSYPFCNT AEQYMLQQSC FNENLETENL GSESVIFNEG KECSSSSSNN NNNIMTNSDN  180
SARFSWENST NDQQNKFDQS QIFQFPVNFG GLIKMETVSH DQTSPWEEDP LKSLSMPEDL  240
VTTAAGNLDY FLQQIS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26660.12e-45MYB family protein