PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028812-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 211aa    MW: 23403.4 Da    PI: 7.2652
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028812-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.59.9e-182481056
                    HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    eq+++Le+ Fe  +++  e++ +LAk lgL+ rq+ +WFqNrRa++k
  AUR62028812-RA  2 EQVKTLEKNFELGNKLEPERKIQLAKALGLQPRQIAIWFQNRRARWK 48
                    8*********************************************9 PP
2HD-ZIP_I/II116.81.3e-37283990
     HD-ZIP_I/II  9 eqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90
                    eqvk+LE++Fe  +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr++dalk++n+ L +++++L++e
  AUR62028812-RA  2 EQVKTLEKNFELGNKLEPERKIQLAKALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFDALKADNDLLLAQNQKLQSE 83
                    9******************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MEQVKTLEKN FELGNKLEPE RKIQLAKALG LQPRQIAIWF QNRRARWKTK QLEKDYDLLK  60
RQFDALKADN DLLLAQNQKL QSEAFLSRSA SSNSLSASGK ASDQPKRTPV SSAEMEAILD  120
ESANEILAGT CEQSDVEGNV DVGPSTDLNQ LREGSECTNL HQLKVQAKIT LELASYGENR  180
SETITSGLAV GSSKEGYLLM NFSGTLKRWK *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14351RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69780.11e-39HD-ZIP family protein