PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028844-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Trihelix

Protein Properties

Length: 233aa MW: 26785.8 Da PI: 9.5507

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028844-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	85.9	4.9e-27	27	125	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 rWt+qe+l+Li+++r e+r+rrg+ + +p+W+ vs++++++g++r+p+qC+++w+nl++++kkike+e+ ++e+ s + + AUR62028844-RA 27 RWTRQEILVLIQGKRVAENRVRRGRsavscdssqgqqqQVEPKWATVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWESLVKDEADSFWLMR 121 8*******************986667777788887799*****************************************999998889888 PP trihelix 83 dqle 86 ++l+ AUR62028844-RA 122 NDLR 125 8875 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MAQQPNNDNT NINNDDDEEE EAARLPRWTR QEILVLIQGK RVAENRVRRG RSAVSCDSSQ 60 GQQQQVEPKW ATVSSYCKRH GVNRGPVQCR KRWSNLAGDF KKIKEWESLV KDEADSFWLM 120 RNDLRREKKL PGSAGRNNEK QQDRINVEIG STSREGRKRK RFMDKDDNNN NGEQDELCQV 180 LEKNGRILSA QLDAYNINLK LDREERRDHA NSLVAVLNKL ADSLGRIADK LS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	5e-60	Trihelix family protein