PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62028897-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TCP

Protein Properties

Length: 208aa MW: 22428.8 Da PI: 5.9918

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62028897-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	80.7	4e-25	1	65	24	88
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg 88 ++a+caar+F+L++eLG+++d++t++WLlq +++ai+++tgt++++as++ +++ss+s++ s + AUR62028897-RA 1 MPALCAARIFQLTKELGHKSDGETVQWLLQHSEQAIIAATGTGTIPASFTsTSGSSVSEQR-TSVS 65 9**********************************************99954444444444.3332 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MPALCAARIF QLTKELGHKS DGETVQWLLQ HSEQAIIAAT GTGTIPASFT STSGSSVSEQ 60 RTSVSSGIVS GFSGGLSLIN ENLGRTHFQT GSWGYGSGTV HVPDPGFSSS SSSLMRENLE 120 CRPKMGVHRT MGMSNLNMGF MNFGQQQQQG RDSLELGLSQ DNVNFGVLNY GAFNQMYQQF 180 RQSREEAGFS CDQQEKFLDD GSSQCSR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	6e-23	TCP family protein