PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028989-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB
Protein Properties Length: 290aa    MW: 32959.6 Da    PI: 9.2161
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028989-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.54.9e-161461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +l +++k +G g+W+  +++ g++R++k+c++rw++yl
   AUR62028989-RA 14 KGSWTAMEDNILSEYIKIHGEGRWRNLPKRAGLKRCGKSCRLRWLNYL 61
                     799*******************************************97 PP
2Myb_DNA-binding53.94e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
   AUR62028989-RA  67 RGNITPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 110
                      7999******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGRSPCCAKE GMNKGSWTAM EDNILSEYIK IHGEGRWRNL PKRAGLKRCG KSCRLRWLNY  60
LRPGIKRGNI TPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT SLSKRLNQHN  120
TNQAANHNLK KTRNDVKNKK LLPTIDDVPK ISTQAIESNV VRTKAVRCTK VFINPQPQQK  180
IIRANKTTNV AVVQPTSSMD YNVENLWIDH NISSPRLLDE EYKMPSDLMM EVSNMGEFNL  240
ISELLKSDFS DICELSNESS KGASDLSPSS PEEPFVLSQE LLEDWLGNQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.12e-60MYB family protein