PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029102-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 686aa MW: 79153.7 Da PI: 6.7156

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029102-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.1	1.4e-23	67	158	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk ++++ r r++ r+gC+akl ++ke +w+v+++++ HnHel AUR62029102-RA 67 EFYSNFARRNGFSIRKARSTESHNLG-VYRRDFVCYRSGFNQPRKKVNVEHPRDRKSVRCGCDAKLYLTKEIvncVTQWYVSQFSNVHNHELL 158 6*******************7777.**************************************99877889************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 686 aa Download sequence
MKPANNIWIQ KEQCPCGDWK CFIKYEGEEQ GQACQPTKNG TSLSSSSEVI FAPYVGQIFK 60 SYDEAFEFYS NFARRNGFSI RKARSTESHN LGVYRRDFVC YRSGFNQPRK KVNVEHPRDR 120 KSVRCGCDAK LYLTKEIVNC VTQWYVSQFS NVHNHELLED DQVRLLPAYR KIQEADQERI 180 ILLSKAGFPV NRIIKILELK KGVQPGQLPF IEKDIRNFLR TCKKTVQEND ALLTEKRVTD 240 MMELLEACKA MAERDGDFIF DFLTDANGKV ENIAWSYGDS VRAFNLFGDA VQFDITYQSI 300 TYGMLLGLLS GIDNHGKPIV FACALVQEEN PHAIVWALQT VVRFMRGRPQ TIVTDLEPGL 360 RDSIVSELPN TKHVISLWYI MSKLSSWFSL PLGLKYSEFK SEFEMVCYVE STEDFGHLWS 420 HLITKFGLGS DKHISLLWSC RACWAFSFIK DCFVARITTA EYMRSVDSFL KGVLNEQTCL 480 QVFFEQVGLA AKLGYGAKED LPFLHLKTCM PVEEHAQGIL TPYAFSVYQH ELVLSVQYAI 540 IEMAKGSYVA CHYKKVDEEY LLLWIQEGEQ IHCSCKGFEQ SGVLCRHALR LFITKNYFQL 600 PYHYFPIRWR WENSFLPMDQ ESSRLVKEEY YRALHSLTDA LLTESLFSKE RFNYAHKELT 660 ALLDQVKNMP VDEVPEILTN NFSES*

Sequence ? help Back to Top

Protein Sequence Length: 686 aa Download sequence

MKPANNIWIQ KEQCPCGDWK CFIKYEGEEQ GQACQPTKNG TSLSSSSEVI FAPYVGQIFK  60
SYDEAFEFYS NFARRNGFSI RKARSTESHN LGVYRRDFVC YRSGFNQPRK KVNVEHPRDR  120
KSVRCGCDAK LYLTKEIVNC VTQWYVSQFS NVHNHELLED DQVRLLPAYR KIQEADQERI  180
ILLSKAGFPV NRIIKILELK KGVQPGQLPF IEKDIRNFLR TCKKTVQEND ALLTEKRVTD  240
MMELLEACKA MAERDGDFIF DFLTDANGKV ENIAWSYGDS VRAFNLFGDA VQFDITYQSI  300
TYGMLLGLLS GIDNHGKPIV FACALVQEEN PHAIVWALQT VVRFMRGRPQ TIVTDLEPGL  360
RDSIVSELPN TKHVISLWYI MSKLSSWFSL PLGLKYSEFK SEFEMVCYVE STEDFGHLWS  420
HLITKFGLGS DKHISLLWSC RACWAFSFIK DCFVARITTA EYMRSVDSFL KGVLNEQTCL  480
QVFFEQVGLA AKLGYGAKED LPFLHLKTCM PVEEHAQGIL TPYAFSVYQH ELVLSVQYAI  540
IEMAKGSYVA CHYKKVDEEY LLLWIQEGEQ IHCSCKGFEQ SGVLCRHALR LFITKNYFQL  600
PYHYFPIRWR WENSFLPMDQ ESSRLVKEEY YRALHSLTDA LLTESLFSKE RFNYAHKELT  660
ALLDQVKNMP VDEVPEILTN NFSES*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein