PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029235-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 240aa    MW: 26569 Da    PI: 7.9223
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029235-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.67.9e-1283130454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RRdr+N++f eL  +l +    + +K +Ka+iL  Av+ + +L
  AUR62029235-RA  83 SKACREKARRDRLNDKFMELGAILEPG---RTPKTDKAAILSDAVRMVTQL 130
                     5678**********************8...8***************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MVSHENPNWL YDYSYIDDIQ ISVPDCNFSA PNSAFNNCQL QQALNVPFNV SADIDGTYGD  60
SDAPKENNSK KRGRSESCAP SSSKACREKA RRDRLNDKFM ELGAILEPGR TPKTDKAAIL  120
SDAVRMVTQL RSEAQKLKDS NSNLQEKIKE LKTEKVELRD EKQRLKAEKD KLEQQLKTMN  180
TQPGYLPAPT AIPAFAPPTQ APGGKLVPFM GYPGVAMWQF MPPASVDTSQ DHVLRPPVA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-100bHLH family protein