PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029330-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 329aa    MW: 36617.2 Da    PI: 8.9667
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029330-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.62e-52301531127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLk+kv++++l++ ++i+e+d+yk++Pw++ +    +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+vls+
  AUR62029330-RA  30 LPPGFRFHPTDEELVVHYLKRKVQSTPLPV-SIIAEIDLYKFDPWNFLAV--FGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLSS 121
                     79****************************.89**************744..4789*************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                     ++++vg+kk Lvfy g+ p+g+kt+W+mheyr
  AUR62029330-RA 122 GNQKVGVKKALVFYGGKPPRGVKTNWIMHEYR 153
                     *******************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MDNTHSPAAA AGGEPQETMS QPQPPPQPQL PPGFRFHPTD EELVVHYLKR KVQSTPLPVS  60
IIAEIDLYKF DPWNFLAVFG EQEWYFFSPR DRKYPNGARP NRAATSGYWK ATGTDKPVLS  120
SGNQKVGVKK ALVFYGGKPP RGVKTNWIMH EYRWVDASKP NNNKPPGYDL CHNKKGGSLR  180
LDDWVLCRIY KKNNTTRPMD HEQDDSMEDL MMMGGLSSSM SMSCNPTSIN NIGLHQPKAN  240
TNSLNYGSFL NTSHVVDQQG LFEGMMGGTH HGAPSSPLLP LKRSLPSLYW GDNDHDSGDN  300
TAVAPTTTDA RGTFRRVFRQ QYPLPGLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-90NAC family protein