PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029344-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 299aa    MW: 33304.4 Da    PI: 9.7223
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029344-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.21.3e-52141391128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeel+v+yL++kv+g++++l ++i+e+d+yk++Pw Lp+k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ 
  AUR62029344-RA  14 LPPGFRFYPTDEELLVQYLCRKVAGHQFSL-QIIAEIDLYKFDPWILPSKAMFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITT- 106
                     79***************************9.89***************8777899***********************************9999. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  AUR62029344-RA 107 QGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MGVQEKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHQ FSLQIIAEID LYKFDPWILP  60
SKAMFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTQGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLT ENTRKSGSSK LDDWVLCRIY KKNSSAAKPT ISKETSTTGS  180
FDWAVLAGLT AAPEFAFTGS AQSQSGQVNN ISNNGNDVFV PSLPPLSQVE SPVENKIRTS  240
GLVDEEVQSG ITSNQRFSTG YFNHNINLFN QNHNNNSVDL FGLSHSSQLS GFGYGYRQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-114NAC family protein