PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62029424-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 159aa    MW: 16450.1 Da    PI: 6.3321
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62029424-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP81.12.8e-251752489
             TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........k 89
                    ++a+caar+F+L++eLG+++d++ti+WLlq a+++i+++tg+++++as+   +++s+s++++s ++        +
  AUR62029424-RA  1 MPALCAARIFQLTRELGHKSDGETIQWLLQHAEQSIIAATGSGTIPASALaASGASVSQQGTSIISginqqhyhH 75
                    9**********************************************8885444444444433222443333331 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MPALCAARIF QLTRELGHKS DGETIQWLLQ HAEQSIIAAT GSGTIPASAL AASGASVSQQ  60
GTSIISGINQ QHYHHKIDDL GGPSNRPTNW AAALVGMGAA GELGLSQDVH VGVLTPQALS  120
QIYQQMGHSR SVHDVGSGLS SLHHQQPSDS KDDSQDSG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27010.17e-25TCP family protein