PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62029605-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NF-YC

Protein Properties

Length: 210aa MW: 22260.2 Da PI: 5.0126

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62029605-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	172.7	4e-54	1	102	4	102
NF-YC 4 sfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 +fw++q ie+a+dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdi AUR62029605-RA 1 MFWSYQrqeIETANDFKNHSLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDI 95 5898887789*********************************************************************************** PP NF-YC 96 vprdelk 102 vprde+k AUR62029605-RA 96 VPRDEIK 102 **975 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MFWSYQRQEI ETANDFKNHS LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI 60 RSWLHAEENK RRTLQKNDIA AAITRTDIFD FLVDIVPRDE IKDEAAGLGM VGGIVGPTGV 120 SPPPGVGVPT ASGVPYYYPP MGQPAPPGVM IGRPAMDPAG LYGVSGPPPP SLAWQSVWQS 180 GHAAGEDGSY GSAASGGGNS GQGNLDGQR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	77	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-89	NF-YC family protein