PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030260-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 253aa    MW: 27074 Da    PI: 8.4264
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030260-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY104.94.2e-33121178259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers ++p++v++tYeg+Hnh 
  AUR62030260-RA 121 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQTCSVKKRVERSFQEPSTVITTYEGQHNHA 178
                     8********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MDYPTLAKSV GVSPTSSEVF SSVVDENPAM AKEKEAAAGV VVGNGGNPST PNSSISSSST  60
EAGGADDGSV GKKDNKQHPN KAVDDQDELK QGTNKGKKKG GKKEREPRFA FMTKSEIDNL  120
EDGYRWRKYG QKAVKNSPYP RSYYRCTTQT CSVKKRVERS FQEPSTVITT YEGQHNHAVP  180
ATLRGHAAAP LPHYSMLAPP LRPPQPLSSS NIPQELLAQL GHCGGYPTVF YGGGKANGGV  240
MANETLNEEE VD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.13e-51WRKY family protein