PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030280-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 344aa MW: 36687.5 Da PI: 6.8696

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030280-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	96.4	2.1e-30	129	182	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl AUR62030280-RA 129 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 182 59*****************.******************************8 PP
2	Myb_DNA-binding	47.9	3.1e-15	131	181	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ AUR62030280-RA 131 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 181 789*****************9*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MREEESNWFS KWDEELPSPD ELISLSQTLI TPDLASAFDI QSPGSNGNTP ISILHHHATS 60 SPQLLSQYHH HGGQQQSSSA PQPPPNQPNS SEFDSSSAEL XXXXXXXXXX XXATSGGGGN 120 DEPARTLKRP RLVWTPQLHK RFVDAVAHLG IKNAVPKTIM QLMSVDGLTR ENVASHLQKY 180 RLYLKRMQGL NNGGGAAGVN GGAGGPNGGS GDPATDHLFA SSPVPAHFLH QNGPGAAGGG 240 RPNSDHFMPY MPVAALNHHQ MAAAVVGHQQ IQAQYQHHRQ LGHFGSGQGG GQFEHPFLSR 300 QAQLGPSRNG MMQSNSGFVE DVESGTANNG GRKVLTLFPT GED*

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MREEESNWFS KWDEELPSPD ELISLSQTLI TPDLASAFDI QSPGSNGNTP ISILHHHATS  60
SPQLLSQYHH HGGQQQSSSA PQPPPNQPNS SEFDSSSAEL XXXXXXXXXX XXATSGGGGN  120
DEPARTLKRP RLVWTPQLHK RFVDAVAHLG IKNAVPKTIM QLMSVDGLTR ENVASHLQKY  180
RLYLKRMQGL NNGGGAAGVN GGAGGPNGGS GDPATDHLFA SSPVPAHFLH QNGPGAAGGG  240
RPNSDHFMPY MPVAALNHHQ MAAAVVGHQQ IQAQYQHHRQ LGHFGSGQGG GQFEHPFLSR  300
QAQLGPSRNG MMQSNSGFVE DVESGTANNG GRKVLTLFPT GED*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10760.1	5e-73	G2-like family protein