PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030330-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

bHLH

Protein Properties

Length: 405aa MW: 45991.8 Da PI: 5.6863

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030330-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	25.7	2.1e-08	85	113	1	29
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk 29 ++ +hn+ Er RR++iN+ ++ Lr lP AUR62030330-RA 85 KKLNHNASERDRRKKINNMYSSLRASLPG 113 6789*********************9996 PP
2	HLH	48	2.2e-15	218	270	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++ +hn+ Er RR++iN+ ++ Lr+llP+ + + kKls +++e++ YI +Lq AUR62030330-RA 218 KKLNHNASERDRRKKINNMYSSLRSLLPTnD---QRKKLSIPATVERVLGYIPQLQ 270 6789***********************66...9999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MLAMSPLCPT NLGWEYPLDL DTNQALFDNL DFDFDTMFLA NISSSQAQDC EVNHQVSSDD 60 HGKRSESPQG TSSTDQLDNN PLLSKKLNHN ASERDRRKKI NNMYSSLRAS LPGIDQRMEG 120 SNVVSFEKMN VELSSLLQMK QMQMEVPISR WEYPLGLDPR QPLDNLDFDS IFLANISSTS 180 QTRDYEDNQM SSDQAKRSES PQGTSSTDQF GKNPSISKKL NHNASERDRR KKINNMYSSL 240 RSLLPTNDQR KKLSIPATVE RVLGYIPQLQ KEVEDLVHKK EDLLSKTSIL QGNARKIVQE 300 ENPNKCIINK TTSCSISSNK LGDKELVIQI SAFERISISE VLLMLEENGY LVLDVSSFQS 360 FGGTTFYNIH LWIQGNCNIN FEKLNEALMF QLQKQQIMHM HVYS*

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MLAMSPLCPT NLGWEYPLDL DTNQALFDNL DFDFDTMFLA NISSSQAQDC EVNHQVSSDD  60
HGKRSESPQG TSSTDQLDNN PLLSKKLNHN ASERDRRKKI NNMYSSLRAS LPGIDQRMEG  120
SNVVSFEKMN VELSSLLQMK QMQMEVPISR WEYPLGLDPR QPLDNLDFDS IFLANISSTS  180
QTRDYEDNQM SSDQAKRSES PQGTSSTDQF GKNPSISKKL NHNASERDRR KKINNMYSSL  240
RSLLPTNDQR KKLSIPATVE RVLGYIPQLQ KEVEDLVHKK EDLLSKTSIL QGNARKIVQE  300
ENPNKCIINK TTSCSISSNK LGDKELVIQI SAFERISISE VLLMLEENGY LVLDVSSFQS  360
FGGTTFYNIH LWIQGNCNIN FEKLNEALMF QLQKQQIMHM HVYS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56970.1	2e-43	bHLH family protein