PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030331-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 139aa    MW: 15915.8 Da    PI: 7.0699
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030331-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.52.8e-0976105130
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPka 30 
                     ++ +hn+ Er RR++i + ++ Lr llP++
  AUR62030331-RA  76 KKLSHNASERVRRKKISNLYSSLRALLPSS 105
                     6789************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MSSICPTYLG WEYPIELGTN QGFNNVDLDA VFLLNFSSSQ SQDYQFQVYD HVKRSELPQD  60
TSSTDHQFDI NPVLSKKLSH NASERVRRKK ISNLYSSLRA LLPSSDHKMG GNYTAKFENL  120
NEVLMSLLKE QKHMQAYY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-13bHLH family protein