PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030618-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 748aa MW: 86560.9 Da PI: 6.6685

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030618-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.6	1.7e-07	114	166	47	90
FAR1 47 k.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + + ++ r+ + tr +Cka+++ k +k+g++ev + +HnHel AUR62030618-RA 114 EmvdeedvnvKIRKPRQVSITRSNCKACIRAKVNKEGQFEVVAHVIQHNHELK 166 14445555445566778889*******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 748 aa Download sequence
MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEGQKKT KLVEMVDEED 120 VNVKIRKPRQ VSITRSNCKA CIRAKVNKEG QFEVVAHVIQ HNHELKKPQW HYLHRSERKM 180 TEEKVVTIKT MKSSGLTTMD TYNYMATEAG GEQNIGHSVV DHLNFCSRLR MEQIEAGDAQ 240 TLVNILSQEQ SEDPNFFFRV KFDKEGRICN IFWRDSMMLE DYRIYGDVLV FDTTYRTNIY 300 NLICAPFVGI NNHWHNCMFA CAFIGDETTD SFVWLLQTFF KAMEDRKPTS IFTDQDQAMA 360 NVILEVIPNT RHRLCIWHLE QNAITRFGAL KKDKEFKFAF NQCLKMCVTE QEFEAKWQAM 420 LQKYELTEHS WYKRVYELKD KWCPTLCRDF FSAGILSSQR SESTNHAIGF RASKATTLIE 480 FYTIFKKTTN RWRSTEKYDE FTCSKSIAFT SLPLSGMLKH AAQMLGSNEE CLLYQVTLED 540 KPWSAHQVNY IQESQTVWCT CKNFEASGWL CYHCIRILHL HSVTRIPDKY VSKRWTKFAK 600 TEAWDRLKNQ DPKQQYIPWR QTMMRKYYNL ILKSQENEET RAFMEESFRN SLKMVEDLLT 660 SAAQKESAEA ASNIPDVADN TQSNTDASSA SSTSTCVPII LDPKRAVTKG RSKRAKGGLE 720 KSKRKRKPAL PPPNSEFGSK TPNLRLF*

Sequence ? help Back to Top

Protein Sequence Length: 748 aa Download sequence

MENSTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEGQKKT KLVEMVDEED  120
VNVKIRKPRQ VSITRSNCKA CIRAKVNKEG QFEVVAHVIQ HNHELKKPQW HYLHRSERKM  180
TEEKVVTIKT MKSSGLTTMD TYNYMATEAG GEQNIGHSVV DHLNFCSRLR MEQIEAGDAQ  240
TLVNILSQEQ SEDPNFFFRV KFDKEGRICN IFWRDSMMLE DYRIYGDVLV FDTTYRTNIY  300
NLICAPFVGI NNHWHNCMFA CAFIGDETTD SFVWLLQTFF KAMEDRKPTS IFTDQDQAMA  360
NVILEVIPNT RHRLCIWHLE QNAITRFGAL KKDKEFKFAF NQCLKMCVTE QEFEAKWQAM  420
LQKYELTEHS WYKRVYELKD KWCPTLCRDF FSAGILSSQR SESTNHAIGF RASKATTLIE  480
FYTIFKKTTN RWRSTEKYDE FTCSKSIAFT SLPLSGMLKH AAQMLGSNEE CLLYQVTLED  540
KPWSAHQVNY IQESQTVWCT CKNFEASGWL CYHCIRILHL HSVTRIPDKY VSKRWTKFAK  600
TEAWDRLKNQ DPKQQYIPWR QTMMRKYYNL ILKSQENEET RAFMEESFRN SLKMVEDLLT  660
SAAQKESAEA ASNIPDVADN TQSNTDASSA SSTSTCVPII LDPKRAVTKG RSKRAKGGLE  720
KSKRKRKPAL PPPNSEFGSK TPNLRLF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-85	FAR1 family protein