PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030642-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HB-other
Protein Properties Length: 208aa    MW: 23909.7 Da    PI: 4.5251
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030642-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox37.15.2e-12130180353
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                      R +++k q+e+Le+++++++ p+ +++  +A+ ++L+ r++  WF  +Ra
  AUR62030642-RA 130 ARKRLKKVQVETLENVYRRTKRPTNTMISSIAHVTNLPRRRILKWFEDKRA 180
                     58999*********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MISSCCLQSP KKEDSNKDDD IDEDGFEALF KQLEEDLKRD EEFLDDGEDE ISEEELAMLE  60
RELEEALAED ENMSALLSVM TNDAAEGKSW QLRRLAQALK VGRRKTSMNL EQKMLSENGD  120
CSEQEICWSA RKRLKKVQVE TLENVYRRTK RPTNTMISSI AHVTNLPRRR ILKWFEDKRA  180
DEGVPADPAS AQQRPYRRSS SESVFTQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130138ARKRLKKVQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.14e-26HB-other family protein