PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62030662-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

CPP

Protein Properties

Length: 846aa MW: 91643.4 Da PI: 7.4002

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62030662-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	24.1	7.1e-08	459	485	15	41
TCR 15 kkYCeCfaagkkCseeCkCedCkNkee 41 + YC+Cfaag +C+e+C C +C+N+ e AUR62030662-RA 459 QFYCDCFAAGFYCGESCACVGCFNRPE 485 57**********************876 PP
2	TCR	50.2	5.3e-16	533	570	1	38
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkN 38 ++k+gCnCkks ClkkYCeC++a++ Cse C+Ce+CkN AUR62030662-RA 533 RHKRGCNCKKSMCLKKYCECYQANVGCSEGCRCEGCKN 570 589**********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MDTPESKSTP ANTRKIKLIN PSPSDSSAFQ DSPVFNYLSN LSPIQPVKGG PVAQGFPGLA 60 SPPLKVSEIL IAFRKLQSSG PNSECSQDHD HDNCHKNERG LGGSIKIEPE FHNRLAYGDQ 120 KTCNTEKLVP DAHCSPSGCL DEFLTDPGNC ANSSQKLQSD NAQPSLEGGC LEKIDVGNGK 180 ALGLNGSALQ KGKRISQAKS RISVRLVKNE PRHVISSSEC SGASSSLLTD HTSEKCQTGD 240 SFNEASHFER GTLRRCLFDE SQRINSVDGP GFWNPIASAQ IQESVNMSTG KLGSEQLNNF 300 SKPAVDACVS SVTDSHAVAV SKPLGIGLHL NSVVYPRSTD SAITNQQSSV MRVERKKLLF 360 LTNNQSDGKV DASNVTGKVL ISSEEIDRHQ ACSVPSSNNT IASEAIEQSN NAIETKLHAA 420 STIINEKITL SSDLVENFES SLGSPNTKRQ ASNLCLTSQF YCDCFAAGFY CGESCACVGC 480 FNRPEYEDTV LETRQQIESR NPLAFAPKVL QTVTASPTSS KVVSNLSTPS SARHKRGCNC 540 KKSMCLKKYC ECYQANVGCS EGCRCEGCKN IYGIREDYNI AREIMLKRAS VEMSEGTMTV 600 NNSFVSSRAH SSPNLTPITP ALQCSDQKKN ALKSRLPFRK FLHPPESHTD TLTSEENPAS 660 PSNSQNHGEL LEKNKCTDVG VPDAEKGLEN TEDRLVLAGD DESVNAHCSS QLSKPDVKNS 720 ILRNKSQPES FAESGPLAPS SSLRWRSSPI TPITQLTTSE LKEFGTGSTH FDMFEDDTPE 780 ILKQSPTPIK SVKLSSPNKK RISPPHNHIN SSESLKISRK FVLRAVPSFP PLTPYSKNSN 840 LDNRG*

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MDTPESKSTP ANTRKIKLIN PSPSDSSAFQ DSPVFNYLSN LSPIQPVKGG PVAQGFPGLA  60
SPPLKVSEIL IAFRKLQSSG PNSECSQDHD HDNCHKNERG LGGSIKIEPE FHNRLAYGDQ  120
KTCNTEKLVP DAHCSPSGCL DEFLTDPGNC ANSSQKLQSD NAQPSLEGGC LEKIDVGNGK  180
ALGLNGSALQ KGKRISQAKS RISVRLVKNE PRHVISSSEC SGASSSLLTD HTSEKCQTGD  240
SFNEASHFER GTLRRCLFDE SQRINSVDGP GFWNPIASAQ IQESVNMSTG KLGSEQLNNF  300
SKPAVDACVS SVTDSHAVAV SKPLGIGLHL NSVVYPRSTD SAITNQQSSV MRVERKKLLF  360
LTNNQSDGKV DASNVTGKVL ISSEEIDRHQ ACSVPSSNNT IASEAIEQSN NAIETKLHAA  420
STIINEKITL SSDLVENFES SLGSPNTKRQ ASNLCLTSQF YCDCFAAGFY CGESCACVGC  480
FNRPEYEDTV LETRQQIESR NPLAFAPKVL QTVTASPTSS KVVSNLSTPS SARHKRGCNC  540
KKSMCLKKYC ECYQANVGCS EGCRCEGCKN IYGIREDYNI AREIMLKRAS VEMSEGTMTV  600
NNSFVSSRAH SSPNLTPITP ALQCSDQKKN ALKSRLPFRK FLHPPESHTD TLTSEENPAS  660
PSNSQNHGEL LEKNKCTDVG VPDAEKGLEN TEDRLVLAGD DESVNAHCSS QLSKPDVKNS  720
ILRNKSQPES FAESGPLAPS SSLRWRSSPI TPITQLTTSE LKEFGTGSTH FDMFEDDTPE  780
ILKQSPTPIK SVKLSSPNKK RISPPHNHIN SSESLKISRK FVLRAVPSFP PLTPYSKNSN  840
LDNRG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	1e-46	CPP family protein