PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030724-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 211aa    MW: 23338.3 Da    PI: 5.7725
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030724-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.71.8e-0858147986
            FAR1   9 evGFsvrkskskks..krngei.tkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtkleleHn 86 
                     + GF v+  +s ++  k+ +++    t++C +   ++++++          + +   t++++++gC+  +  +++++gkwe+ + el+H 
  AUR62030724-RA  58 MEGFGVVLGQSAYKtlKDGRKVkRAVTWKCECASLPDTRRRIggtrlprelEGEPIATKKSKKCGCETGMYASLKEHGKWEIVRRELKHE 147
                     67999999888776564444441456899*999999999888999999888788888********************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MISSEVAEDI CVSLSYNEEG GIMDLINFEE GEGEGDGDIG ELCPYEGGEG MDGDGGNMEG  60
FGVVLGQSAY KTLKDGRKVK RAVTWKCECA SLPDTRRRIG GTRLPRELEG EPIATKKSKK  120
CGCETGMYAS LKEHGKWEIV RRELKHEPHK VVASINNENL NFQVRKEDKS VEIEIRKNQN  180
SSSSMTISRS KPFSGTCKML YQLINNQHNQ *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
177120RKVKRAVTWKCECASLPDTRRRIGGTRLPRELEGEPIATKKSKK