PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030939-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 323aa    MW: 35366.2 Da    PI: 4.5866
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030939-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.61.3e-16168204135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cgt +  Tp +Rrgp+g++tLCnaCGl+++ kg+
  AUR62030939-RA 168 CQHCGTNEksTPAMRRGPSGPRTLCNACGLMWANKGT 204
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEVSTKQFDD QNQLAIMEEN DDDDFSAGGE SAGEDAHVSI AIPGEVYVFP AVTPDKVQAV  60
LLLLGGRDVS ASVPTSEFLL QQHHMALGDP SCGQKISHRI ASLVRFREKR KERCYDKKIR  120
YTCRKEVAQR MHRKNGQFVS LKDRYNLAAV NWDPNDGTPP PECVPRSCQH CGTNEKSTPA  180
MRRGPSGPRT LCNACGLMWA NKGTLRDLSK AGRIIPFQGD LDTPSDVKPL AIEPDSSYGN  240
QETQKSPEEA KPFTSESGKT STREDEQDLL ENDEAVTNDS AVSLQNASVS VTEQEAIEEV  300
TNGSGTEFEI PSGFDESMGA FY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.11e-62GATA family protein