PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031093-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

ARF

Protein Properties

Length: 634aa MW: 69710.5 Da PI: 6.9961

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031093-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	76.8	2.4e-24	115	216	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD v+F + + AUR62031093-RA 115 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFL--RGAD 206 99**************************963.3445679********************************************..3489 PP E..EEEEE-S CS B3 90 felvvkvfrk 99 +el+++++r+ AUR62031093-RA 207 GELRLGIRRA 216 999**996 PP
2	Auxin_resp	115.4	4.9e-38	242	322	2	82
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+s++ vF+v+YnPras+seFvv++++++k+l++++ vGmRfkm+fe ed+ err++G+v+g+ +ldp+rW++SkWr+L AUR62031093-RA 242 FDAISSGRVFNVCYNPRASSSEFVVPLRRFLKSLDTSFNVGMRFKMRFEAEDAGERRYTGVVTGIAELDPMRWSGSKWRCL 322 6799****************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 634 aa Download sequence
MMGVLIDLNT VNEDEEDNNN SNNSSGNNYQ NTLQNLCASS SSSVCMELWH ACAGPLISLP 60 KKGSLAEVAT DEVYAQVSLI PESQFEEKLK ESETDVDGDE EDFEDIVKST TPHMFCKTLT 120 ASDTSTHGGF SVPRRAAEDC FPPLDYKQQR PSQELVAKDL HGLEWRFRHI YRGQPRRHLL 180 TTGWSAFVNK KKLVSGDAVL FLRGADGELR LGIRRAVQLK GPTSFSALPT RPMSNNSVSA 240 AFDAISSGRV FNVCYNPRAS SSEFVVPLRR FLKSLDTSFN VGMRFKMRFE AEDAGERRYT 300 GVVTGIAELD PMRWSGSKWR CLMVRWDDVE VNRHGRVSPW EIEPTGSFPS PSSLMASGLK 360 RSRIGLPLTK PEFPIPSGVG MPDFGESMGF RKVLQGQEKL GSRSACDGND NPHLSSSDPG 420 RCYPSSIPPG DFGRTAKGIG FRESFQFQKV LQGQEIRHLS PAQVDGFTSS ANRGHEGGGP 480 LEIYEGVQVP NCGNGWLKAQ VSSPSSVLMF PHPSIQQARS FRSPICQPRL MSMEHMNYSG 540 VPAYNSLSKA SDELVPAGKA SCRLFGFSLT EGEHRVVKER NHNSSFPPPE TSFWPLVEGQ 600 PCYKSPSVTK VGSNCPGAND LYAVRDMLLD IAL*

Sequence ? help Back to Top

Protein Sequence Length: 634 aa Download sequence

MMGVLIDLNT VNEDEEDNNN SNNSSGNNYQ NTLQNLCASS SSSVCMELWH ACAGPLISLP  60
KKGSLAEVAT DEVYAQVSLI PESQFEEKLK ESETDVDGDE EDFEDIVKST TPHMFCKTLT  120
ASDTSTHGGF SVPRRAAEDC FPPLDYKQQR PSQELVAKDL HGLEWRFRHI YRGQPRRHLL  180
TTGWSAFVNK KKLVSGDAVL FLRGADGELR LGIRRAVQLK GPTSFSALPT RPMSNNSVSA  240
AFDAISSGRV FNVCYNPRAS SSEFVVPLRR FLKSLDTSFN VGMRFKMRFE AEDAGERRYT  300
GVVTGIAELD PMRWSGSKWR CLMVRWDDVE VNRHGRVSPW EIEPTGSFPS PSSLMASGLK  360
RSRIGLPLTK PEFPIPSGVG MPDFGESMGF RKVLQGQEKL GSRSACDGND NPHLSSSDPG  420
RCYPSSIPPG DFGRTAKGIG FRESFQFQKV LQGQEIRHLS PAQVDGFTSS ANRGHEGGGP  480
LEIYEGVQVP NCGNGWLKAQ VSSPSSVLMF PHPSIQQARS FRSPICQPRL MSMEHMNYSG  540
VPAYNSLSKA SDELVPAGKA SCRLFGFSLT EGEHRVVKER NHNSSFPPPE TSFWPLVEGQ  600
PCYKSPSVTK VGSNCPGAND LYAVRDMLLD IAL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33860.1	1e-171	ARF family protein