PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031095-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

VOZ

Protein Properties

Length: 410aa MW: 45933.9 Da PI: 7.7279

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031095-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	438.5	8.6e-135	133	349	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 ppp+aflgpkcalwdc+rpaqgs+w+ dycssfhatlalneg+pg++pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+el AUR62031095-RA 133 PPPAAFLGPKCALWDCPRPAQGSDWWLDYCSSFHATLALNEGPPGMSPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPEL 227 89******************************************************************************************* PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklv 190 fdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm ef+glkrsyymdpqp++++ewhlyeyein++d +alyrlelklv AUR62031095-RA 228 FDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMDEFSGLKRSYYMDPQPLNNYEWHLYEYEINKCDVCALYRLELKLV 322 ******************************************************************************************* PP VOZ 191 dekksakgkvskdsladlqkklgrlta 217 d kk+++gk ++d++++lqk++grlta AUR62031095-RA 323 DRKKTPRGKTANDTVSELQKQMGRLTA 349 ***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 410 aa Download sequence
MRKGLKRNSC KSASHQLFKD KAKNRVDDLQ MIFSDLQSAR KDSRTLDAAV LEEQGPEVKP 60 GSLEQNFSPV DQCKGSPGFR SLTTNMEMAN QLDYNQFNLH VDLEHHYLSG YNGVDVSALY 120 AHPISGFLPN VCPPPAAFLG PKCALWDCPR PAQGSDWWLD YCSSFHATLA LNEGPPGMSP 180 VLRPGGIGLK DGLLFAALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL SVLEGETIRE 240 WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMDEF SGLKRSYYMD PQPLNNYEWH 300 LYEYEINKCD VCALYRLELK LVDRKKTPRG KTANDTVSEL QKQMGRLTAE FPLDNRRPLK 360 GRAKFNSKDG VGNLRSDPNQ LISGDKTFDH GVGPPYGYLV ENIGDYYLK*

Sequence ? help Back to Top

Protein Sequence Length: 410 aa Download sequence

MRKGLKRNSC KSASHQLFKD KAKNRVDDLQ MIFSDLQSAR KDSRTLDAAV LEEQGPEVKP  60
GSLEQNFSPV DQCKGSPGFR SLTTNMEMAN QLDYNQFNLH VDLEHHYLSG YNGVDVSALY  120
AHPISGFLPN VCPPPAAFLG PKCALWDCPR PAQGSDWWLD YCSSFHATLA LNEGPPGMSP  180
VLRPGGIGLK DGLLFAALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL SVLEGETIRE  240
WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMDEF SGLKRSYYMD PQPLNNYEWH  300
LYEYEINKCD VCALYRLELK LVDRKKTPRG KTANDTVSEL QKQMGRLTAE FPLDNRRPLK  360
GRAKFNSKDG VGNLRSDPNQ LISGDKTFDH GVGPPYGYLV ENIGDYYLK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-165	VOZ family protein