PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031138-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 248aa    MW: 27961.8 Da    PI: 5.0726
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031138-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP95.51.1e-29589386
             TCP  3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnss 86
                    ++k r+ ki+T++g+RdRR+Rlsa++a++f+d+qd+LG+d++ ++++WL+ +ak +i++l ++s++++s+  ++ + ++s  +s 
  AUR62031138-RA  5 ARKGRSNKIYTARGPRDRRIRLSADIAIQFYDVQDRLGYDRATEAVDWLISKAKGSIDKLFDNSFQQQSKHlTHLDAQNSFYQSD 89
                    6999***********************************************************9888866664444444444333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MRTSARKGRS NKIYTARGPR DRRIRLSADI AIQFYDVQDR LGYDRATEAV DWLISKAKGS  60
IDKLFDNSFQ QQSKHLTHLD AQNSFYQSDY YLTESMSGSE DSGVQVDSLT DYGVLNLHNS  120
YDNISTYNCT MDSSMILPCI QMENSSEDQC FAHSTISSPL DLQHSSLPSI QQMENKDQNP  180
RTVMFNSKFS SKYGEHPFIS NSGPLFFQAP NNESPPIHTP ISDPELNLCL PGNYTSTFGD  240
SEKWSIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.13e-27TCP family protein