PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031273-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 210aa    MW: 23294.3 Da    PI: 7.9857
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031273-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278.2e-09108150754
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++ r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  AUR62031273-RA 108 IAARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 150
                     56799*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MDIDLFKSTP DDQIEMMLMT MHMDKPGATS GNEGGGSLPY DDNTPMMSND SNENNGTSSS  60
PSQKQTSMAA MREMIFRIAA MQPIYIDPEA VKPPKRRNVR ISKDPQSIAA RHRRERISER  120
IRILQRLVPG GTKMDTASML DEAIHYVKFL KSQVQTLERS AINNNNRPVP PPVSTGIGYP  180
SGYSFAGHQL HHMNAAPHHN VQQYSDSDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.12e-44bHLH family protein