PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031305-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NAC
Protein Properties Length: 159aa    MW: 18487.9 Da    PI: 7.7792
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031305-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.52.3e-35101301128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeelvv++L+++ +  + +  +vi+++d+y ++Pw+L+ k+ +e ++wy++s++         +nr+t+sgyWk  g d++++s+
  AUR62031305-RA  10 LPPGFRFCPTDEELVVHFLRRRDALLPYHP-DVIPDLDVYPYHPWELEGKAFSEGSKWYYYSRK--------MQNRVTESGYWKPMGMDEPIMSS 95 
                     79************************9888.99**************977778899*****987........469*******************9 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +++ vg+kk  vf+ g+ p  + t+W+mheyrl
  AUR62031305-RA  96 ssSRKIVGMKKYYVFHIGEPPADVWTSWIMHEYRL 130
                     767778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MADDNHGDNL PPGFRFCPTD EELVVHFLRR RDALLPYHPD VIPDLDVYPY HPWELEGKAF  60
SEGSKWYYYS RKMQNRVTES GYWKPMGMDE PIMSSSSSRK IVGMKKYYVF HIGEPPADVW  120
TSWIMHEYRL PDSGSTSKSG SRKRGQPKLV SRLLHYID*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.11e-54NAC family protein