PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031613-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 255aa    MW: 28705.9 Da    PI: 7.1481
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031613-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.51.1e-1866118456
                     -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     + +++ eq+++Le+ Fe+ +++  e++ +LAk lgL+ rqV +WFqNrRa++k
  AUR62031613-RA  66 KKRLNMEQVKTLEKNFEQANKLEPERKVQLAKALGLQPRQVAIWFQNRRARWK 118
                     556899**********************************************9 PP
2HD-ZIP_I/II130.47.2e-4264155192
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                     ekk+rl+ eqvk+LE++Fe+ +kLeperKv+la++Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr++d+lk++n++L +++++L++el 
  AUR62031613-RA  64 EKKKRLNMEQVKTLEKNFEQANKLEPERKVQLAKALGLQPRQVAIWFQNRRARWKTKQLEKDYSVLKRQFDSLKADNDSLLSQNKKLHAELI 155
                     69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MMNRSMSFSG YHLHQIDHTQ NQDDVLGGGG HEEHEHDHHG GGGDQDEMSD DGSQVVVVGP  60
RGGEKKKRLN MEQVKTLEKN FEQANKLEPE RKVQLAKALG LQPRQVAIWF QNRRARWKTK  120
QLEKDYSVLK RQFDSLKADN DSLLSQNKKL HAELITLRNR EPADYGAINL NNADTKSYWS  180
NNGSEISSDM NLNNASRTVT PRTGSPLSTN PSTKLQFPPN SFMPTNLSAG GIQLWHVEWG  240
HEIEKDSLSY VLFS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113121RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15150.14e-60HD-ZIP family protein