PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031619-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 240aa    MW: 27394.6 Da    PI: 6.7191
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031619-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.21.1e-1123103287
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEE.EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktl.tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       +lt+ +v  + +l++p + a+    +     ++ ++ ++  +sW++++i  k+  +  + + Wk+Fv +n+Lk+gD+++F+l+++
  AUR62031619-RA  23 HIILTKTHVCPRYLLTIPAEGARILPDI-----EVpMILTRGTKSWRMNYI-GKNVVHKRFDNRWKQFVVDNKLKVGDICTFELMSK 103
                     5667788888888899999998444433.....3304455677*******5.5555556799*********************9853 PP
2B337.64e-121562183798
                     EEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-..SSSEE..EEEEE- CS
              B3  37 tledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkld..grsefelvvkvfr 98 
                     t  ++  +sWe ++ + +++ +  + l + WkeFv +n+L++gD+++F+++  g++  +l+v+v+r
  AUR62031619-RA 156 T-LTRGKKSWETTY-FGRHPTHkrFEL-SSWKEFVVDNKLRVGDVCIFERMtlGDEALKLKVQVLR 218
                     3.33577*******.544444421555.5********************66557899999999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MKPRVNTCED IDIEPKTGAP FFHIILTKTH VCPRYLLTIP AEGARILPDI EVPMILTRGT  60
KSWRMNYIGK NVVHKRFDNR WKQFVVDNKL KVGDICTFEL MSKDPMRDMN EEQQLDPVSI  120
DTEEDEEIEP LSGNPMFHTI PAAIAHILPH KTAPVTLTRG KKSWETTYFG RHPTHKRFEL  180
SSWKEFVVDN KLRVGDVCIF ERMTLGDEAL KLKVQVLRGD FPSILLGNDG TSDNPIVVE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18000.11e-06B3 family protein