PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62031621-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Protein Properties

Length: 150aa MW: 16919.6 Da PI: 9.604

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62031621-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	40.9	3.7e-13	56	147	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 lt+ +v+ + +l++p + a+ +++ ++ ++ +sW++++i ++ + l k Wk+F+ +n+Lk+gD+++F+l++++ +l+v+v AUR62031621-RA 56 HVNLTKTHVSPLYLLTIPAEGARLLPNIE-A---PVILTRGTESWTMNYIGNNI-VHKRLDKRWKQFAVDNKLKVGDVCTFELTSKDPMRLKVQV 145 56678888999999999999997665553.3...35566788*****65444.4467**********************988999999999 PP E- CS B3 97 fr 98 +r AUR62031621-RA 146 LR 147 87 PP

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence
MSAFYLKHTS SYKSLSSEAY YGPVPEFGFS AKEMKPRANT CEDIDIEPKT GAPFFHVNLT 60 KTHVSPLYLL TIPAEGARLL PNIEAPVILT RGTESWTMNY IGNNIVHKRL DKRWKQFAVD 120 NKLKVGDVCT FELTSKDPMR LKVQVLRVL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	108	115	KRLDKRWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18000.1	2e-07	B3 family protein