PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031682-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family NF-YC
Protein Properties Length: 96aa    MW: 10731.5 Da    PI: 8.7427
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031682-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC56.65.7e-181752498
           NF-YC 24 arikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                    arikki++adedv +i+  +Pvl+ska elf+ +l  r++  + +   +t+    ++ ++ +  +fdfl d+v +
  AUR62031682-RA  1 ARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHLKHCIHSFSMFDFLKDVVSK 75
                    7***********************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
ARIKKIMQAD EDVGKIAMAV PVLVSKALEL FLQDLCDRTY DITLQRGAKT MSSLHLKHCI  60
HSFSMFDFLK DVVSKVPDYG NSDANADDRT AMKRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.17e-51NF-YC family protein