PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031845-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 185aa    MW: 21140.4 Da    PI: 8.9133
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031845-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.93.8e-083163435
                    HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TT CS
             HLH  4 ahnerErrRRdriNsafeeLrellPk.askaps 35
                    +h  +Er+RR+++N+ +  Lr+l P    k ps
  AUR62031845-RA 31 SHITVERNRRRQMNDHLKVLRSLTPCfYIKKPS 63
                    899**********************95544444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MENPCMAAEH INQRKHHLRR RHRTPTTHIM SHITVERNRR RQMNDHLKVL RSLTPCFYIK  60
KPSPRQLANA NSITNHSFQF DCGKELVASC NSPVADVEAK ISGSNVVLRV ISKRTHGQLL  120
KIISTLEKLS FEILHLNISS MDDTVLYYFV VKIGLECQLS MEELAAEVQR CFCTNDTINN  180
ITEI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.15e-59bHLH family protein