PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031888-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 252aa    MW: 27211.3 Da    PI: 6.882
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031888-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.9e-17186220135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  AUR62031888-RA 186 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 220
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MEAPDFFVED LLDLSNGGDE MMTDAFFDTV TGNSTDSSTL TPASDSCTSS VSCAPSFPDS  60
YFSGADLCVP YDDMAELEWL SNFVEESFST DDLHKLQFIP TNPQQPGPAR QGGPNPPTTV  120
PGKARSKRSR VAPCDWSTRL LMVSAPSPAT SSSNSGPSTG AKKQPSMTKR RDSGGPDNGP  180
GEVRRCLHCA AEKTPQWRTG PMGPKTLCNA CGVRYKSGRL VPEYRPAASP TFVSAKHSNS  240
HRKVIELRRQ KE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-67GATA family protein