PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032017-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family FAR1
Protein Properties Length: 287aa    MW: 31360.6 Da    PI: 9.8219
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032017-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.88.1e-0957155185
            FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                     k++++Y+k+ GF v+ s+ +      + +e ++ t++C + g + ++ kk            e+   +r++++++C  kl  k ++ g w+++k 
  AUR62032017-RA  57 KYFRNYGKQEGFGVVWSSGTFVgkgANAKEKKSVTWTCECFGMPGRKCKKtgptfvsdsqiCEEVCVKRKSKKVQCSVKLYAKVNEVGDWVIDKA 151
                     689*************9988776668889999***********999988889**9988777666677**************************** PP

            FAR1  82 eleH 85 
                     eleH
  AUR62032017-RA 152 ELEH 155
                     **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MTDNGEVNVG EESYKTPAKG KSTVAITFEI EELANVEVSL LPPDVGMVFD SWKKIDKYFR  60
NYGKQEGFGV VWSSGTFVGK GANAKEKKSV TWTCECFGMP GRKCKKTGPT FVSDSQICEE  120
VCVKRKSKKV QCSVKLYAKV NEVGDWVIDK AELEHKGVVG TPSSVCAEKK STPSTQRHGS  180
REGGEEGPVV HVTDPPMPKG PAHWTTDSRY KSCLEKPKKA KTTKDNQGNN KNRNKKGSQS  240
EVTPPSPFQT PISQLFAAST QSGYIPILPR PRPPVTPPPH SSQRTK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80010.18e-06FAR1 family protein