PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032216-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LFY
Protein Properties Length: 637aa    MW: 70140.1 Da    PI: 9.3746
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032216-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY531.63.1e-16229361946385
         FLO_LFY  46 rklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrk.ll...... 133
                         +leelf++yG+ry+t+akiae+Gftv+tLvdmk+ee+d++m+sls++fr+dllvGeryGikaa+raerrrle+ e+++++r+ ++      
  AUR62032216-RA 293 SGSGGLEELFQTYGIRYYTAAKIAEMGFTVNTLVDMKEEEVDEMMNSLSHLFRWDLLVGERYGIKAAIRAERRRLEDLEESRRHRHnHMslsntp 387
                     22559************************************************************************888888777422456666 PP

         FLO_LFY 134 .sedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeer 227
                       + +++ ldalsqeglsee v +eke +gsgg++   +e+v+a+ ++++++++++  kk++++++ +            +++ ++ ++ + ++r
  AUR62032216-RA 388 pPDSSHHPLDALSQEGLSEEGV-HEKEVVGSGGGN---WEMVGAPPTHTNQDHQQR--KKHRKQQHLQ-----------ARNTVQNMMTLTTTNR 465
                     44445569***********988.568999998887...999999964433333222..1222222211...........1222222333333444 PP

         FLO_LFY 228 qrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnal 322
                           +  e gevargkknGLDYLf+LyeqCr+fL qvq+iakerGekcPtkvtnqvfr+akkaga+yinkPkmrhYvhCYalhcLdee+snal
  AUR62032216-RA 466 ----KLVGQETGEVARGKKNGLDYLFHLYEQCRDFLHQVQTIAKERGEKCPTKVTNQVFRFAKKAGATYINKPKMRHYVHCYALHCLDEETSNAL 556
                     ....47889************************************************************************************** PP

         FLO_LFY 323 rrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385
                     rrafkergenvGawrqacykplvaiaarq+wdida+fn+hprLsiWYvPtkLrq Ch+er+++
  AUR62032216-RA 557 RRAFKERGENVGAWRQACYKPLVAIAARQEWDIDAIFNSHPRLSIWYVPTKLRQHCHAERNSS 619
                     ************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    
MMMIATLWYE LICFLNNLPE LLTEHIKHFF KKKDLGVFLR SRLKRRRTKP TCSLFLPDRK  60
AAQSTPRVDK SRLFCSHCKR IGHDNSGCFI LHGYPPWWLE KYGKKGVIAF SGQAASVLGS  120
RPPATTAISA SSSVATIVDH SKPTVRDHAV GSPLGVASSV PSPDTLSALS KLQPEHVHML  180
LNMHVLEVGE TSTELGSPDS SDRTLLDTPS SSPTTTPTSA ATPLLNAAGS LVRNNPAATN  240
ADRNSPAVST VVATASGTGS NTGDDPSSST LDLGRGQRPS AAAANAGGSG ASSGSGGLEE  300
LFQTYGIRYY TAAKIAEMGF TVNTLVDMKE EEVDEMMNSL SHLFRWDLLV GERYGIKAAI  360
RAERRRLEDL EESRRHRHNH MSLSNTPPPD SSHHPLDALS QEGLSEEGVH EKEVVGSGGG  420
NWEMVGAPPT HTNQDHQQRK KHRKQQHLQA RNTVQNMMTL TTTNRKLVGQ ETGEVARGKK  480
NGLDYLFHLY EQCRDFLHQV QTIAKERGEK CPTKVTNQVF RFAKKAGATY INKPKMRHYV  540
HCYALHCLDE ETSNALRRAF KERGENVGAW RQACYKPLVA IAARQEWDID AIFNSHPRLS  600
IWYVPTKLRQ HCHAERNSSN TSNSISAGAG PHHLPF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13147KKKDLGVFLRSRLKRRR
24350LKRRRTKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-124LFY family protein