PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032262-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 243aa    MW: 26364.1 Da    PI: 9.0923
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032262-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.6e-1091135554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+ +      K + a++L + v+Y+k L
  AUR62032262-RA  91 HSIAERLRRERIAERIRALQELVPSvN------KTDRAAMLDEIVDYVKFL 135
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MMLQLSSGPG GFHGPSVFPL GLSLDQAGKP NSGFMKHDEG SSSANKRFRD DPQHHLVYHG  60
QPMSNPVPVA PHQPAVRPRV RARRGQATDP HSIAERLRRE RIAERIRALQ ELVPSVNKTD  120
RAAMLDEIVD YVKFLRLQVK VLSMSRLGGA GAVVPLVTDM PISSVEEEGG EGGRGQPVWE  180
KWSNDGTERQ VAKLMEENVG AAMQFLQSKA LCIMPISLAS AIYHTQPPDA GSLVKPESNP  240
PS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196101RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.22e-86bHLH family protein