PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032454-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

Nin-like

Protein Properties

Length: 936aa MW: 103733 Da PI: 5.1684

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032454-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.9	4.9e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek++sl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ AUR62032454-RA 592 AEKTVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 643 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 936 aa Download sequence
MEYSFSPKEK GDSFWGSTSP QSDIPMAVNG ETMNSAEDHQ FVNISDMMSL DGYGGWCNSP 60 SSNDQLLASY VLSSLPFMPS NYAAYDQLSF AENANSAFPM NDSGCSTLNV FGSPLNHVDK 120 MVFPHKDAQL SPQVGSSEDN DFSSKQGNIF MLSQNRIPQP LGLSLPERML RMLSLFKESS 180 GGGILAQVWV PIRSGDHYIL STCEQPYLLD QMLLGYREVS RSYTFSTELC PGSFPGLPGR 240 VFISKLPEWT SNVSYYSSAE YLRVKHALDH EVRGSVALPI FSPDENSCVA VLELVTVREK 300 SNFDTEMESV CHALEAVNLR TATPPRLLHQ RLSLNQRTAL TEITDVLRAV CHAHRLPLAL 360 TWIPCTFEEE DGEKRFSVYV QDNILNLNEK SLLCIEETAC YVIDKEMQGF VTACVEHCLE 420 EGQGVAGKAL QSNLPFFFPD IKNYHISEYP LVQHARKFGL GAAVAIRLRS TYTGNADYIL 480 EFFLPLNIKG NKEQQLLLDS LAGTMQRICK SLRTVTDAEL VGSPDSKVEN PEASPSFFPR 540 DLPQLFAQSG SIGTEQISFD SPSIINDHIK EDGHSEKASG SRRPMEKKRS TAEKTVSLSV 600 LQQYFSGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVEGV 660 EGGLKFDPMT GELVAAGSVI QELDARNNLF LPGKILPVRK CETVMQDEMC FPSKCLVGEI 720 PAVKLENDSC AIGQQKKSIT SSDCIEEVRK SDLDIGSLHL RDHSQYRHFV SQNPGCTVAP 780 DEMESDDGVT EHNQATSSGM TDSSNASGSM SSSPNSNHKR RQSEDKMSHE DGGSRIAIKA 840 TYKEDTVRFK FELSAGCLHL YEEVANRFKI QLGTFQLKYL DDEEEWVMLV SDSDLQECLE 900 IMEYLGKNSI KFLVRDLTCS MGSSGGSNYF IPGSC*

Sequence ? help Back to Top

Protein Sequence Length: 936 aa Download sequence

MEYSFSPKEK GDSFWGSTSP QSDIPMAVNG ETMNSAEDHQ FVNISDMMSL DGYGGWCNSP  60
SSNDQLLASY VLSSLPFMPS NYAAYDQLSF AENANSAFPM NDSGCSTLNV FGSPLNHVDK  120
MVFPHKDAQL SPQVGSSEDN DFSSKQGNIF MLSQNRIPQP LGLSLPERML RMLSLFKESS  180
GGGILAQVWV PIRSGDHYIL STCEQPYLLD QMLLGYREVS RSYTFSTELC PGSFPGLPGR  240
VFISKLPEWT SNVSYYSSAE YLRVKHALDH EVRGSVALPI FSPDENSCVA VLELVTVREK  300
SNFDTEMESV CHALEAVNLR TATPPRLLHQ RLSLNQRTAL TEITDVLRAV CHAHRLPLAL  360
TWIPCTFEEE DGEKRFSVYV QDNILNLNEK SLLCIEETAC YVIDKEMQGF VTACVEHCLE  420
EGQGVAGKAL QSNLPFFFPD IKNYHISEYP LVQHARKFGL GAAVAIRLRS TYTGNADYIL  480
EFFLPLNIKG NKEQQLLLDS LAGTMQRICK SLRTVTDAEL VGSPDSKVEN PEASPSFFPR  540
DLPQLFAQSG SIGTEQISFD SPSIINDHIK EDGHSEKASG SRRPMEKKRS TAEKTVSLSV  600
LQQYFSGSLK DAAKSIGVCP TTLKRICRQH GISRWPSRKI NKVNRSLRKI QTVLDSVEGV  660
EGGLKFDPMT GELVAAGSVI QELDARNNLF LPGKILPVRK CETVMQDEMC FPSKCLVGEI  720
PAVKLENDSC AIGQQKKSIT SSDCIEEVRK SDLDIGSLHL RDHSQYRHFV SQNPGCTVAP  780
DEMESDDGVT EHNQATSSGM TDSSNASGSM SSSPNSNHKR RQSEDKMSHE DGGSRIAIKA  840
TYKEDTVRFK FELSAGCLHL YEEVANRFKI QLGTFQLKYL DDEEEWVMLV SDSDLQECLE  900
IMEYLGKNSI KFLVRDLTCS MGSSGGSNYF IPGSC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43500.1	0.0	Nin-like family protein